Last change
on this file since 1734 was
1734,
checked in by rkrimmel, 10 years ago
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Added automatically created javadoc, still needs to be commented properly though
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File size:
1.1 KB
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Line | |
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1 | /* |
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2 | * |
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3 | */ |
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4 | package de.ugoe.cs.autoquest.tasktrees.alignment.matrix; |
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5 | |
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6 | // TODO: Auto-generated Javadoc |
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7 | /** |
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8 | * The Class UPGMAMatrix. |
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9 | */ |
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10 | public class UPGMAMatrix extends StaticTriangleMatrix { |
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11 | |
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12 | /** |
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13 | * Instantiates a new UPGMA matrix. |
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14 | * |
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15 | * @param size the size |
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16 | */ |
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17 | public UPGMAMatrix(int size) { |
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18 | super(size); |
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19 | } |
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20 | |
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21 | /* (non-Javadoc) |
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22 | * @see de.ugoe.cs.autoquest.tasktrees.alignment.matrix.StaticTriangleMatrix#size() |
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23 | */ |
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24 | @Override |
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25 | public int size() { |
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26 | return size; |
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27 | } |
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28 | |
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29 | /* (non-Javadoc) |
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30 | * @see de.ugoe.cs.autoquest.tasktrees.alignment.matrix.StaticTriangleMatrix#toString() |
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31 | */ |
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32 | @Override |
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33 | public String toString() { |
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34 | String result = ""; |
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35 | for (int i = 0; i < size; i++) { |
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36 | result = result + String.format("%8d", i); |
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37 | } |
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38 | result += "\n"; |
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39 | |
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40 | for (int i = 0; i < size; i++) { |
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41 | for (int j = 0; j < size; j++) { |
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42 | if (i < j) { |
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43 | if (Double.isInfinite(this.get(i, j))) { |
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44 | result = result + " -------"; |
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45 | } else { |
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46 | result = result |
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47 | + String.format("%+8.2f", this.get(i, j)); |
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48 | } |
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49 | } else { |
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50 | result = result + (" "); |
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51 | } |
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52 | } |
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53 | result = result + " " + i + "\n"; |
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54 | } |
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55 | return result; |
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56 | } |
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57 | |
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58 | } |
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