source: branches/autoquest-core-tasktrees-alignment/src/main/java/de/ugoe/cs/autoquest/tasktrees/alignment/matrix @ 1675

Name Size Rev Age Author Last Change
../
UPGMAMatrix.java 744 bytes 1580   10 years rkrimmel Further code cleanup
TriangleMatrix.java 1.1 KB 1572   10 years rkrimmel Added parts of the PAL library, implemented UPGMA Algoritm for Feng …
SubstitutionMatrix.java 210 bytes 1578   10 years rkrimmel Added Constants for the gap and unmatched symbol
PairwiseAlignmentStorage.java 1022 bytes 1589   10 years rkrimmel Refactoring and code cleanup
PairwiseAlignmentGenerator.java 1.2 KB 1667   10 years rkrimmel Removed unused code (bohoo, all the time i needed to write it)
ObjectDistanceSubstitionMatrix.java 3.3 KB 1675   10 years rkrimmel Fixed first iteration of sequence detection and replacement
NearbySubstitutionMatrix.java 856 bytes 1580   10 years rkrimmel Further code cleanup
DummySubstitutionMatrix.java 355 bytes 1649   10 years rkrimmel Adding tests to some classes.
DifferenceSubstitutionMatrix.java 1.0 KB 1580   10 years rkrimmel Further code cleanup
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