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Last change
on this file since 1586 was
1586,
checked in by rkrimmel, 10 years ago
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Adding simple smith waterman and changing alignment algorithm creation to factory pattern
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File size:
306 bytes
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| 1 | package de.ugoe.cs.autoquest.tasktrees.alignment.algorithms; |
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| 2 | |
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| 3 | import java.util.ArrayList; |
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| 4 | |
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| 5 | public interface AlignmentAlgorithm { |
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| 6 | |
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| 7 | /** |
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| 8 | * Get the alignment score between the two input strings. |
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| 9 | */ |
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| 10 | public abstract double getAlignmentScore(); |
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| 11 | |
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| 12 | public abstract ArrayList<NumberSequence> getAlignment(); |
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| 13 | |
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| 14 | } |
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