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Last change
on this file since 1586 was
1586,
checked in by rkrimmel, 10 years ago
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Adding simple smith waterman and changing alignment algorithm creation to factory pattern
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File size:
365 bytes
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| 1 | package de.ugoe.cs.autoquest.tasktrees.alignment.algorithms; |
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| 2 | |
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| 3 | import de.ugoe.cs.autoquest.tasktrees.alignment.matrix.SubstitutionMatrix; |
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| 4 | |
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| 5 | public class AlignmentAlgorithmFactory { |
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| 6 | |
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| 7 | |
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| 8 | public static AlignmentAlgorithm create(int[] input1, int[] input2, SubstitutionMatrix submat,float threshold) { |
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| 9 | |
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| 10 | return new SmithWaterman(input1,input2,submat,threshold); |
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| 11 | } |
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| 12 | } |
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