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1 | // BranchLimits.java |
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2 | // |
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3 | // (c) 1999-2001 PAL Development Core Team |
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4 | // |
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5 | // This package may be distributed under the |
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6 | // terms of the Lesser GNU General Public License (LGPL) |
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7 | |
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8 | |
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9 | package de.ugoe.cs.autoquest.tasktrees.alignment.pal.misc; |
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10 | |
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11 | |
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12 | /** |
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13 | * limits for branch lengths |
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14 | * |
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15 | * @version $Id: BranchLimits.java,v 1.9 2001/09/09 22:15:16 alexi Exp $ |
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16 | * |
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17 | * @author Korbinian Strimmer |
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18 | */ |
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19 | public interface BranchLimits |
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20 | { |
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21 | // |
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22 | // Public stuff |
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23 | // |
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24 | |
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25 | /** minimum branch length */ |
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26 | double MINARC = 1.0e-9; |
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27 | |
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28 | /** maximum branch length */ |
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29 | double MAXARC = 100.0; |
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30 | |
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31 | /** default branch length */ |
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32 | double DEFAULT_LENGTH = 0.04; |
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33 | |
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34 | /** maximum tolerated error when determining branch lengths */ |
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35 | double ABSTOL = 5.0e-07; |
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36 | |
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37 | /** desired fractional digits when determining branch lengths */ |
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38 | int FRACDIGITS = 6; |
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39 | } |
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