source:
trunk/autoquest-plugin-alignment/src/main/java/de/ugoe/cs/autoquest/plugin/alignment/SubstitutionMatrix.java
@
1311
Last change on this file since 1311 was 1311, checked in by rkrimmel, 11 years ago | |
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File size: 198 bytes |
Rev | Line | |
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[1311] | 1 | package de.ugoe.cs.autoquest.plugin.alignment; |
2 | ||
3 | public interface SubstitutionMatrix { | |
4 | ||
5 | public String info(); | |
6 | ||
7 | public double getDistance(int pos1, int pos2); | |
8 | ||
9 | public double getGapPenalty(); | |
10 | ||
11 | ||
12 | } |
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