source:
trunk/autoquest-plugin-alignment/src/main/java/de/ugoe/cs/autoquest/plugin/alignment/SubstitutionMatrix.java
@
1314
| Last change on this file since 1314 was 1314, checked in by rkrimmel, 11 years ago | |
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| File size: 198 bytes | |
| Line | |
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| 1 | package de.ugoe.cs.autoquest.plugin.alignment; |
| 2 | |
| 3 | public interface SubstitutionMatrix { |
| 4 | |
| 5 | public String info(); |
| 6 | |
| 7 | public double getDistance(int pos1, int pos2); |
| 8 | |
| 9 | public double getGapPenalty(); |
| 10 | |
| 11 | |
| 12 | } |
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