Changeset 1656 for branches/autoquest-core-tasktrees-alignment-test

Timestamp:

08/09/14 22:45:41 (10 years ago)

Author:

rkrimmel

Message:

Fixed model replacment, index updates still to go.

File:

• branches/autoquest-core-tasktrees-alignment-test/src/test/java/de/ugoe/cs/autoquest/tasktrees/alignment/algorithms/SmithWatermanRepeatedTest.java (modified) (2 diffs)

branches/autoquest-core-tasktrees-alignment-test/src/test/java/de/ugoe/cs/autoquest/tasktrees/alignment/algorithms/SmithWatermanRepeatedTest.java

@@ -68 +68 @@
                 assertNotNull(testalignment1);
                 testalignment1.align(ns1, ns2,submat,4);
-                testalignment1.printDPMatrix();
-                testalignment1.printAlignment();
+
                 
                 //testalignment1.getMatches().get(0).getFirstSequence().printSequence();
@@ -96 +95 @@
                 assertNotNull(testalignment1);
                 testalignment1.align(ns1, ns2,submat,3);
-                assertTrue(testalignment1.getAlignmentScore()==1.0);
+                testalignment1.printDPMatrix();
+                testalignment1.printAlignment();
+                assertTrue(testalignment1.getAlignmentScore()==4.0);
                 
                 }