Changeset 1662 for branches/autoquest-core-tasktrees-alignment

Timestamp:

08/12/14 00:47:22 (10 years ago)

Author:

rkrimmel

Message:

Changed index updating procedure.

Location:

branches/autoquest-core-tasktrees-alignment/src/main/java/de/ugoe/cs/autoquest/tasktrees

Files:

• alignment/algorithms/NumberSequence.java (modified) (3 diffs)
• temporalrelation/SequenceForTaskDetectionRuleAlignment.java (modified) (4 diffs)

branches/autoquest-core-tasktrees-alignment/src/main/java/de/ugoe/cs/autoquest/tasktrees/alignment/algorithms/NumberSequence.java

@@ -45 +45 @@
 
         //Recursive check if sequence contains pattern at position i
-        public boolean matches(int i, int[] p1, int[] p2 ,int ip1,int ip2) {
+        private boolean matches(int i, int[] p1, int[] p2 ,int ip1,int ip2) {
                 
                 if(p1.length==ip1) {
@@ -69 +69 @@
         
         //Searching occurrences of pattern
-
         public LinkedList<Integer> containsPattern(Match pattern) {
                 LinkedList<Integer> result = new LinkedList<Integer>();
@@ -78 +77 @@
                 while (i < sequence.length ) {
                         if(matches(i,pat1,pat2,0,0)) {
-                                System.out.println(i);
                                 result.add(i);
-                                System.out.println("FOUND MATCH AT: " + i);
-                                this.printSequence();
-                                pattern.getFirstSequence().printSequence();
-                                pattern.getSecondSequence().printSequence();
                         }
                         i++;

branches/autoquest-core-tasktrees-alignment/src/main/java/de/ugoe/cs/autoquest/tasktrees/temporalrelation/SequenceForTaskDetectionRuleAlignment.java

@@ -232 +232 @@
                         }
                 };
-                // Collections.sort(matchseqs, comparator);
-
-                // TODO: Harmonize matches: finding double matches and merge them
-                /*
-                 * Console.traceln(Level.INFO, "harmonizing matches"); int i=0;
-                 * 
-                 * while(i<matchseqs.size()) { int j=i; while(j<matchseqs.size()) {
-                 * if(i!=j) { if(matchseqs.get(i).equals(matchseqs.get(j))) {
-                 * //matchseqs.get(i).addOccurencesOf(matchseqs.get(j));
-                 * matchseqs.remove(j);
-                 * 
-                 * //System.out.println("Sequence " + i);
-                 * //matchseqs.get(i).getFirstSequence().printSequence();
-                 * //matchseqs.get(i).getSecondSequence().printSequence();
-                 * //System.out.println("is equal to sequence " + j);
-                 * //matchseqs.get(j).getFirstSequence().printSequence();
-                 * //matchseqs.get(j).getSecondSequence().printSequence(); continue; } }
-                 * j++; } i++; } Collections.sort(matchseqs, comparator);
-                 */
+                Collections.sort(matchseqs, comparator);
 
                 HashMap<Integer, List<MatchOccurence>> replacedOccurences = new HashMap<Integer, List<MatchOccurence>>();
@@ -277 +259 @@
                                         System.out.println();
 
-                                        //System.out.println("Printing session: ");
+                                        // System.out.println("Printing session: ");
                                         for (int j = 0; j < sessions.get(oc.getSequenceId()).size(); j++) {
-                                          System.out.println(j + ": "+ sessions.get(oc.getSequenceId()).get(j));
+                                                System.out.println(j + ": "
+                                                                + sessions.get(oc.getSequenceId()).get(j));
                                         }
 
-                                        // Check if nothing has been replaced in the sequence we
-                                        // want to replace
-                                        if (replacedOccurences.get(oc.getSequenceId()) == null) {
-                                                replacedOccurences.put(oc.getSequenceId(),
-                                                                new LinkedList<MatchOccurence>());
-                                        } else {
-                                                // check if we have any replaced occurence with indexes
-                                                // smaller than ours. If so, we need to adjust our start
-                                                // and endpoints
-                                                // of the replacement.
-                                                // Also do a check if we have replaced this specific
-                                                // MatchOccurence in this sequence already. Jump to the
-                                                // next occurence if this is the case.
-                                                // This is no more neccessary once the matches are
-                                                // harmonized.
-                                                for (Iterator<MatchOccurence> jt = replacedOccurences
-                                                                .get(oc.getSequenceId()).iterator(); jt
-                                                                .hasNext();) {
-                                                        MatchOccurence tmpOC = jt.next();
-                                                        if (tmpOC.getStartindex() == oc.getStartindex()) {
-                                                                System.out.println("This position has already been replaced in this iteration");
-                                                                continue invalidOccurence;
-                                                                
-                                                        }
-                                                        if (tmpOC.getStartindex() < oc
-                                                                        .getStartindex()) {
-                                                                int diff = tmpOC.getEndindex()
-                                                                                - tmpOC.getStartindex();
-                                                                // Just to be sure.
-                                                                if (diff > 0) {
-                                                                        System.out.println("Old index: Start: "
-                                                                                        + oc.getStartindex() + " End "
-                                                                                        + oc.getEndindex());
-                                                                        oc.setStartindex(oc.getStartindex() - diff+1);
-                                                                        oc.setEndindex(oc.getEndindex() - diff+1);
-                                                                        System.out.println("Updated index: Start: "
-                                                                                        + oc.getStartindex() + " End "
-                                                                                        + oc.getEndindex());
-                                                                } else {
-                                                                        Console.traceln(Level.WARNING,
-                                                                                        "End index of a Match before start. This should never happen");
-                                                                }
-                                                        }
-                                                }
-                                        }
-
-                                        
-                                        ISequenceInstance sequenceInstances = RuleUtils.createNewSubSequenceInRange(
-                                                        sessions.get(oc.getSequenceId()),
-                                                        oc.getStartindex(), oc.getEndindex(), task,
-                                                        taskFactory, taskBuilder);
-                                        
-                                        //Adjust the length of the match regarding to the length of instance. (OptionalInstances may be shorter) 
-                                        oc.setEndindex(oc.getStartindex()+sequenceInstances.size()-RuleUtils.missedOptionals);
-                                        replacedOccurences.get(oc.getSequenceId()).add(oc);
-                                }
-                        
-                                System.out.println();
+                                        ISequenceInstance sequenceInstances = RuleUtils
+                                                        .createNewSubSequenceInRange(
+                                                                        sessions.get(oc.getSequenceId()),
+                                                                        oc.getStartindex(), oc.getEndindex(), task,
+                                                                        taskFactory, taskBuilder);
+                                        // Adjust the length of the match regarding to the length of
+                                        // instance. (OptionalInstances may be shorter)
+                                        oc.setEndindex(oc.getStartindex()
+                                                        + sequenceInstances.size()
+                                                        - RuleUtils.missedOptionals);
+
+                                        updateMatchIndexes(matchseqs, oc.getSequenceId(),
+                                                        oc.getStartindex(), oc.getEndindex());
+
+                                }
                         }
                 }
@@ -373 +313 @@
 
                 return appData.getResult();
+        }
+
+        // check if we have any replaced occurence with indexes
+        // smaller than ours. If so, we need to adjust our start
+        // and endpoints
+        // of the replacement.
+        // Also do a check if we have replaced this specific
+        // MatchOccurence in this sequence already. Jump to the
+        // next occurence if this is the case.
+        private void updateMatchIndexes(List<Match> matchseqs, int sequenceId,
+                        int startindex, int endindex) {
+
+                for (int i = 0; i < matchseqs.size(); i++) {
+                        for (Iterator<MatchOccurence> it = matchseqs.get(i).getOccurences()
+                                        .iterator(); it.hasNext();) {
+                                MatchOccurence tmpOC = it.next();
+                                // if the matchoccurence starts in a sequence that has been
+                                // replaced right now we delete it
+                                if (tmpOC.getStartindex() > startindex
+                                                && tmpOC.getStartindex() < endindex) {
+                                        it.remove();
+                                } else if (tmpOC.getStartindex() > endindex) {
+                                        int diff =  endindex-startindex;
+                                        // Just to be sure.
+                                        if (diff > 0) {
+                                                System.out.println("Old index: Start: "
+                                                                + tmpOC.getStartindex() + " End "
+                                                                + tmpOC.getEndindex());
+                                                tmpOC.setStartindex(tmpOC.getStartindex() - diff + 1);
+                                                tmpOC.setEndindex(tmpOC.getEndindex() - diff + 1);
+                                                System.out.println("Updated index: Start: "
+                                                                + tmpOC.getStartindex() + " End "
+                                                                + tmpOC.getEndindex());
+                                        } else {
+                                                Console.traceln(Level.WARNING,
+                                                                "End index of a Match before start. This should never happen");
+                                        }
+                                }
+                        }
+                }
         }
 
@@ -422 +402 @@
                                 appData.getNumber2Task().put(templist.getSequence()[i],
                                                 taskInstance.getTask());
-                                
-                                //if(j==1) {
-                                //      System.out.println(i + ": TaskID: " +
-                                //      taskInstance.getTask().getId()+ " Numbersequence: " +
-                                //      templist.getSequence()[i]);
-                                //}
-                                
+
+                                // if(j==1) {
+                                // System.out.println(i + ": TaskID: " +
+                                // taskInstance.getTask().getId()+ " Numbersequence: " +
+                                // templist.getSequence()[i]);
+                                // }
+
                         }
                         // Each NumberSequence is identified by its id, beginning to count