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ugoe

Timestamp:

08/31/12 10:30:28 (12 years ago)

Author:

sherbold

Message:

added manuals for the commands calcCoverage, calcEntropy, deleteObject, flattenModel, generateFixedLengthSequences, generateGreedy, generateHybrid, generateReplayfile, listSymbols, load, loadObject, modelSize, printDot, printTrieDot, save, saveObject, sequenceStatistics, showMarkovModel, showTime, showTrie, startFileListener, stopFileListener, trainDFA, trainPPM, and updateModel

Location:

Files:

r667	r726
136	136	@Override
137	137	public String help() {
138		return "calcCoverage <modelname> <observedSequences> [~~sequenceNames~~] <minCovLength> <maxCovLength>";
	138	return "calcCoverage <modelname> <observedSequences> [<sequenceNames>] <minCovLength> <maxCovLength>";
139	139	}
140	140

r667	r726
90	90	@Override
91	91	public String help() {
92		return "generateRandomSequenecs <model~~Name> <sequencesName> <numSessions> <minLength> <maxL~~ength> {<maxIter>} {<validEnd>}";
	92	return "generateRandomSequenecs <modelname> <sequencesName> <numSequences> <minlength> <maxlength> {<maxIter>} {<validEnd>}";
93	93	}
94	94

r667	r726
68	68	@Override
69	69	public String help() {
70		return "listS~~tates <modelN~~ame> {<sort>}";
	70	return "listSymbols <modelname> {<sort>}";
71	71	}
72	72

r667	r726
18	18	* <p>
19	19	* Command to print basic statistical information about stored sequences, e.g.,
20		* how many there are of which lenght.
	20	* how many there are of which length.
21	21	* </p>
22	22	*

r667	r726
40	40	@Override
41	41	public String help() {
42		return "showMarkovModel <modelName> {<showNodeNames>}";
	42	return "showMarkovModel <modelname> {<showNodeNames>}";
43	43	}
44	44

r664	r726
24	24	@Override
25	25	public String help() {
26		return "trainDFA <modelName> <sequencesName>";
	26	return "trainDFA <modelname> <sequencesName>";
27	27	}
28	28

r664	r726
32	32	@Override
33	33	public String help() {
34		return "trainMarkovModel <modelName> <sequencesName> {<order>}";
	34	return "trainMarkovModel <modelname> <sequencesName> {<order>}";
35	35	}
36	36

r664	r726
45	45	@Override
46	46	public String help() {
47		return "trainPPM <modelName> <sequencesName> <probEscape> <maxOrder> {<minOrder>}";
	47	return "trainPPM <modelname> <sequencesName> <probEscape> <maxOrder> {<minOrder>}";
48	48	}
49	49

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