Last change
on this file since 1734 was
1734,
checked in by rkrimmel, 10 years ago
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Added automatically created javadoc, still needs to be commented properly though
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File size:
1.2 KB
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1 | /* |
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2 | * |
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3 | */ |
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4 | package de.ugoe.cs.autoquest.tasktrees.alignment.algorithms; |
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5 | |
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6 | import java.util.ArrayList; |
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7 | |
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8 | import de.ugoe.cs.autoquest.tasktrees.alignment.matrix.SubstitutionMatrix; |
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9 | |
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10 | // TODO: Auto-generated Javadoc |
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11 | /** |
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12 | * The Interface AlignmentAlgorithm. |
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13 | */ |
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14 | public interface AlignmentAlgorithm { |
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15 | |
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16 | /** |
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17 | * Align. |
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18 | * |
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19 | * @param input1 the input1 |
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20 | * @param input2 the input2 |
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21 | * @param submat the submat |
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22 | * @param threshold the threshold |
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23 | */ |
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24 | void align(NumberSequence input1, NumberSequence input2, |
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25 | SubstitutionMatrix submat, float threshold); |
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26 | |
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27 | /** |
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28 | * Gets the alignment. |
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29 | * |
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30 | * @return the alignment |
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31 | */ |
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32 | public abstract ArrayList<NumberSequence> getAlignment(); |
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33 | |
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34 | /** |
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35 | * Get the alignment score between the two input strings. |
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36 | * |
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37 | * @return the alignment score |
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38 | */ |
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39 | public abstract double getAlignmentScore(); |
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40 | |
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41 | /** |
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42 | * Gets the matches. |
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43 | * |
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44 | * @return the matches |
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45 | */ |
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46 | public abstract ArrayList<Match> getMatches(); |
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47 | |
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48 | /** |
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49 | * Gets the max score. |
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50 | * |
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51 | * @return the max score |
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52 | */ |
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53 | public double getMaxScore(); |
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54 | |
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55 | /** |
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56 | * Prints the alignment. |
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57 | */ |
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58 | public abstract void printAlignment(); |
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59 | |
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60 | /** |
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61 | * Prints the dp matrix. |
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62 | */ |
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63 | public abstract void printDPMatrix(); |
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64 | |
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65 | } |
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