Changeset 1568 for branches/ralph/src/main/java/de/ugoe/cs/autoquest/tasktrees/alignment/substitution/NearbySubstitutionMatrix.java

Timestamp:

06/18/14 08:59:41 (10 years ago)

Author:

rkrimmel

Message:

Building distance matrix between sequences

File:

• branches/ralph/src/main/java/de/ugoe/cs/autoquest/tasktrees/alignment/substitution/NearbySubstitutionMatrix.java (modified) (2 diffs)

branches/ralph/src/main/java/de/ugoe/cs/autoquest/tasktrees/alignment/substitution/NearbySubstitutionMatrix.java

@@ -29 +29 @@
          * @see de.ugoe.cs.autoquest.plugin.alignment.SubstitutionMatrix#getDistance(int, int)
          */
-        public float getDistance(int pos1, int pos2) {
+        public double getDistance(int pos1, int pos2) {
                 int difference = Math.abs(input1[pos1]-input2[pos2]); 
                 if(difference < range) {
@@ -41 +41 @@
 
         @Override
-        public float getGapPenalty() {
+        public double getGapPenalty() {
                 return -range-1;
         }