Changeset 1581 for branches/ralph/src
- Timestamp:
- 06/26/14 23:18:23 (10 years ago)
- File:
-
- 1 edited
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branches/ralph/src/main/java/de/ugoe/cs/autoquest/tasktrees/alignment/algorithms/SmithWatermanRepeated.java
r1578 r1581 227 227 if(count != 0) 228 228 { 229 if (length1+length2+2 == count) { 230 Console.traceln(Level.WARNING, "Traceback longer than both sequences summed up!"); 231 break; 232 } 229 233 aligned1[count] = tmp.getXvalue(); 230 234 aligned2[count] = tmp.getYvalue(); … … 233 237 tmp = tmp.getPrevious(); 234 238 count++; 235 if (length1+length2+2 == count) { 236 Console.traceln(Level.WARNING, "Traceback longer than both sequences summed up!"); 237 break; 238 } 239 239 240 240 } while(tmp != null); 241 241 count--;
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