Changeset 1555 for branches/ralph/src/main/java/de/ugoe/cs/autoquest/tasktrees/temporalrelation/SequenceForTaskDetectionRuleAlignment.java

Timestamp:

05/25/14 16:51:10 (10 years ago)

Author:

rkrimmel

Message:

Smith waterman working again

File:

• branches/ralph/src/main/java/de/ugoe/cs/autoquest/tasktrees/temporalrelation/SequenceForTaskDetectionRuleAlignment.java (modified) (3 diffs)

branches/ralph/src/main/java/de/ugoe/cs/autoquest/tasktrees/temporalrelation/SequenceForTaskDetectionRuleAlignment.java

@@ -123 +123 @@
         this.preparationTaskHandlingStrategy = new TaskHandlingStrategy(minimalTaskEquality);
         this.identityTaskHandlingStrategy = new TaskHandlingStrategy(TaskEquality.IDENTICAL);
+        numberseqs = new ArrayList<NumberSequence>();
         
     }
@@ -140 +141 @@
     public RuleApplicationResult apply(List<IUserSession> sessions) {
         RuleApplicationData appData = new RuleApplicationData(sessions);
-        numberseqs = new ArrayList<NumberSequence>();
+        
         
         
         
         // this is the real rule application. Loop while something is replaced.
-        SymbolMap<ITaskInstance, ITask> uniqueTasks = harmonizeEventTaskInstancesModel(appData,numberseqs);
+        SymbolMap<ITaskInstance, ITask> uniqueTasks = harmonizeEventTaskInstancesModel(appData);
         ObjectDistanceSubstitionMatrix submat = new ObjectDistanceSubstitionMatrix(uniqueTasks);  
         submat.generate();
         
-        
-        SmithWaterman sm = new SmithWaterman(numberseqs.get(0).getSequence(), numberseqs.get(0).getSequence(), submat);
+        SmithWaterman sm = new SmithWaterman(numberseqs.get(1).getSequence(), numberseqs.get(1).getSequence(), submat);
         sm.printDPMatrix();
       
@@ -201 +201 @@
      * @return Returns the unique tasks symbol map
      */
-    private SymbolMap<ITaskInstance, ITask> harmonizeEventTaskInstancesModel(RuleApplicationData appData, ArrayList<NumberSequence> numberseqs) {
+    private SymbolMap<ITaskInstance, ITask> harmonizeEventTaskInstancesModel(RuleApplicationData appData) {
         Console.traceln(Level.INFO, "harmonizing task model of event task instances");
         appData.getStopWatch().start("harmonizing event tasks");