Changeset 1654 for branches/autoquest-core-tasktrees-alignment-test/src/test/java/de/ugoe/cs/autoquest/tasktrees/alignment/algorithms/SmithWatermanRepeatedTest.java

Timestamp:

08/08/14 22:43:30 (10 years ago)

Author:

rkrimmel

Message:

Adding Debug output to find this freaking damn error.

File:

• branches/autoquest-core-tasktrees-alignment-test/src/test/java/de/ugoe/cs/autoquest/tasktrees/alignment/algorithms/SmithWatermanRepeatedTest.java (modified) (4 diffs)

branches/autoquest-core-tasktrees-alignment-test/src/test/java/de/ugoe/cs/autoquest/tasktrees/alignment/algorithms/SmithWatermanRepeatedTest.java

@@ -24 +24 @@
                 AlignmentAlgorithm testalignment1 = AlignmentAlgorithmFactory
                                 .create();
+                
+                assertNotNull(testalignment1);
                 testalignment1.align(ns1, ns2,submat,5);
 
@@ -44 +46 @@
                 AlignmentAlgorithm testalignment1 = AlignmentAlgorithmFactory
                                 .create();
+                assertNotNull(testalignment1);
                 testalignment1.align(ns1, ns2,submat,5);
                 assertTrue(testalignment1.getAlignmentScore()==5);
@@ -63 +66 @@
                 AlignmentAlgorithm testalignment1 = AlignmentAlgorithmFactory
                                 .create();
+                assertNotNull(testalignment1);
                 testalignment1.align(ns1, ns2,submat,4);
                 testalignment1.printDPMatrix();
@@ -90 +94 @@
                 AlignmentAlgorithm testalignment1 = AlignmentAlgorithmFactory
                                 .create();
+                assertNotNull(testalignment1);
                 testalignment1.align(ns1, ns2,submat,3);
-                //assertTrue(testalignment1.getAlignmentScore()==7);
+                assertTrue(testalignment1.getAlignmentScore()==1.0);
                 
                 }