Timeline


and

07/20/14:

20:43 Changeset [1619] by rkrimmel
Detecting matches in other matches

07/16/14:

18:07 Changeset [1618] by rkrimmel
Startet implementing signigicant match detection
11:02 Changeset [1617] by rkrimmel
Better output of matches

07/15/14:

20:54 Changeset [1616] by rkrimmel
Small fixes
15:56 Changeset [1615] by rkrimmel
Fixed bug in needlemanwunsch traceback
13:45 Changeset [1614] by pharms
* bugfix and test for correct query handling

07/14/14:

23:27 Changeset [1613] by rkrimmel
Removing some unused code
23:27 Changeset [1612] by rkrimmel
Removed parameters from alignmentalgorihm factory constructor and changed …
13:38 Changeset [1611] by rkrimmel
Fixed wrongly commited file HttpSession?.xsd

07/11/14:

17:08 Changeset [1610] by rkrimmel
Fixed wrong version of pom.xml
16:21 Changeset [1609] by sherbold
* removed unnecessary import
16:21 Changeset [1608] by sherbold
* changed test case so that it is running for now; needs to be adapted as …
16:19 Changeset [1607] by sherbold
* removed unnecessary file copies from POM
16:17 Changeset [1606] by sherbold
* fixed test case; can now create result dir
15:56 Changeset [1605] by sherbold
* fixed POM
15:49 Changeset [1604] by sherbold
* sharing autoquest-plugin-uml code
15:47 Changeset [1603] by sherbold
14:10 Changeset [1602] by sherbold
14:10 Changeset [1601] by sherbold
Share project "autoquest-plugin-uml" into …
14:09 Changeset [1600] by sherbold
* the methodName of the SOAPEventType is now normalized, e.g., by removing …
11:58 Changeset [1599] by pharms
* equals check for SOAP events
08:58 Changeset [1598] by rkrimmel
Fixed printAlignment() method
08:58 Changeset [1597] by rkrimmel
Fixed printAlignment() method
08:58 Changeset [1596] by rkrimmel
Fixed printAlignment() method

07/10/14:

18:28 Changeset [1595] by rkrimmel
Small bugfixes
08:37 Changeset [1594] by rkrimmel
Small fixes to the new method

07/09/14:

22:50 Changeset [1593] by rkrimmel
Adding alignment datastructure
22:49 Changeset [1592] by rkrimmel
Trying new approach
13:35 Changeset [1591] by sherbold
* made the soapRequest and soapResponse fields of the SOAPEventType …
13:34 Changeset [1590] by sherbold
* added dependency for Apache commons-lang
12:13 Changeset [1589] by rkrimmel
Refactoring and code cleanup

07/08/14:

21:38 Changeset [1588] by rkrimmel
Fixed Needleman Wunsch Algorithm

07/04/14:

00:38 Changeset [1587] by rkrimmel
Adding needleman wunsch

06/30/14:

08:51 Changeset [1586] by rkrimmel
Adding simple smith waterman and changing alignment algorithm creation to …

06/29/14:

11:11 Changeset [1585] by rkrimmel
Multiple Alignment first version

06/27/14:

15:25 Changeset [1584] by rkrimmel
Some refactoring for storing the initial alignments so we don't need to do …

06/26/14:

23:34 Changeset [1583] by rkrimmel
Small fixes and comments.
23:19 Changeset [1582] by rkrimmel
Adding class to store all binary alignments
23:18 Changeset [1581] by rkrimmel
Fixed check if traceback is too long.

06/25/14:

22:22 Changeset [1580] by rkrimmel
Further code cleanup
22:02 Changeset [1579] by rkrimmel
Code cleanup, removed alot of unneccessary code from pal sources
19:21 Changeset [1578] by rkrimmel
Added Constants for the gap and unmatched symbol
16:31 Changeset [1577] by rkrimmel
Finished UPGMA implementation
16:30 Changeset [1576] by rkrimmel
Removing unneccessary debug output
16:12 Changeset [1575] by rkrimmel
Fixed wrong initialization of the first column in dynamic programming …

06/23/14:

08:38 Changeset [1574] by rkrimmel
Improvements to smith waterman
00:06 Changeset [1573] by rkrimmel
Now really adding PAL Library
00:05 Changeset [1572] by rkrimmel
Added parts of the PAL library, implemented UPGMA Algoritm for Feng …

06/21/14:

13:55 Changeset [1571] by rkrimmel
Adding FitchMargoliashMatrix?@
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